#! /usr/bin/python
# -*- coding: utf8 -*-
import tensorflow as tf
import os, re
from sys import platform as _platform
import collections
import random
import numpy as np
import warnings
from six.moves import xrange
from tensorflow.python.platform import gfile
import re
## Iteration functions
[docs]def generate_skip_gram_batch(data, batch_size, num_skips, skip_window, data_index=0):
"""Generate a training batch for the Skip-Gram model.
Parameters
----------
data : a list
To present context.
batch_size : an int
Batch size to return.
num_skips : an int
How many times to reuse an input to generate a label.
skip_window : an int
How many words to consider left and right.
data_index : an int
Index of the context location.
without using yield, this code use data_index to instead.
Returns
--------
batch : a list
Inputs
labels : a list
Labels
data_index : an int
Index of the context location.
Examples
--------
- Setting num_skips=2, skip_window=1, use the right and left words.
In the same way, num_skips=4, skip_window=2 means use the nearby 4 words.
>>> data = [1,2,3,4,5,6,7,8,9,10,11]
>>> batch, labels, data_index = tl.nlp.generate_skip_gram_batch(data=data, batch_size=8, num_skips=2, skip_window=1, data_index=0)
>>> print(batch)
... [2 2 3 3 4 4 5 5]
>>> print(labels)
... [[3]
... [1]
... [4]
... [2]
... [5]
... [3]
... [4]
... [6]]
References
-----------
- `TensorFlow word2vec tutorial <https://www.tensorflow.org/versions/r0.9/tutorials/word2vec/index.html#vector-representations-of-words>`_
"""
# global data_index # you can put data_index outside the function, then
# modify the global data_index in the function without return it.
# note: without using yield, this code use data_index to instead.
assert batch_size % num_skips == 0
assert num_skips <= 2 * skip_window
batch = np.ndarray(shape=(batch_size), dtype=np.int32)
labels = np.ndarray(shape=(batch_size, 1), dtype=np.int32)
span = 2 * skip_window + 1 # [ skip_window target skip_window ]
buffer = collections.deque(maxlen=span)
for _ in range(span):
buffer.append(data[data_index])
data_index = (data_index + 1) % len(data)
for i in range(batch_size // num_skips):
target = skip_window # target label at the center of the buffer
targets_to_avoid = [ skip_window ]
for j in range(num_skips):
while target in targets_to_avoid:
target = random.randint(0, span - 1)
targets_to_avoid.append(target)
batch[i * num_skips + j] = buffer[skip_window]
labels[i * num_skips + j, 0] = buffer[target]
buffer.append(data[data_index])
data_index = (data_index + 1) % len(data)
return batch, labels, data_index
## Sampling functions
[docs]def sample(a=[], temperature=1.0):
"""Sample an index from a probability array.
Parameters
----------
a : a list
List of probabilities.
temperature : float or None
The higher the more uniform.\n
When a = [0.1, 0.2, 0.7],\n
temperature = 0.7, the distribution will be sharpen [ 0.05048273 0.13588945 0.81362782]\n
temperature = 1.0, the distribution will be the same [0.1 0.2 0.7]\n
temperature = 1.5, the distribution will be filtered [ 0.16008435 0.25411807 0.58579758]\n
If None, it will be ``np.argmax(a)``
Notes
------
- No matter what is the temperature and input list, the sum of all probabilities will be one.
Even if input list = [1, 100, 200], the sum of all probabilities will still be one.
- For large vocabulary_size, choice a higher temperature to avoid error.
"""
b = np.copy(a)
try:
if temperature == 1:
return np.argmax(np.random.multinomial(1, a, 1))
if temperature is None:
return np.argmax(a)
else:
a = np.log(a) / temperature
a = np.exp(a) / np.sum(np.exp(a))
return np.argmax(np.random.multinomial(1, a, 1))
except:
# np.set_printoptions(threshold=np.nan)
# print(a)
# print(np.sum(a))
# print(np.max(a))
# print(np.min(a))
# exit()
message = "For large vocabulary_size, choice a higher temperature\
to avoid log error. Hint : use ``sample_top``. "
warnings.warn(message, Warning)
# print(a)
# print(b)
return np.argmax(np.random.multinomial(1, b, 1))
[docs]def sample_top(a=[], top_k=10):
"""Sample from ``top_k`` probabilities.
Parameters
----------
a : a list
List of probabilities.
top_k : int
Number of candidates to be considered.
"""
idx = np.argpartition(a, -top_k)[-top_k:]
probs = a[idx]
# print("new", probs)
probs = probs / np.sum(probs)
choice = np.random.choice(idx, p=probs)
return choice
## old implementation
# a = np.array(a)
# idx = np.argsort(a)[::-1]
# idx = idx[:top_k]
# # a = a[idx]
# probs = a[idx]
# print("prev", probs)
# # probs = probs / np.sum(probs)
# # choice = np.random.choice(idx, p=probs)
# # return choice
## Vector representations of words (Advanced) UNDOCUMENT
[docs]class SimpleVocabulary(object):
"""Simple vocabulary wrapper, see create_vocab().
Parameters
------------
vocab : A dictionary of word to word_id.
unk_id : Id of the special 'unknown' word.
"""
def __init__(self, vocab, unk_id):
"""Initializes the vocabulary."""
self._vocab = vocab
self._unk_id = unk_id
def word_to_id(self, word):
"""Returns the integer id of a word string."""
if word in self._vocab:
return self._vocab[word]
else:
return self._unk_id
[docs]class Vocabulary(object):
"""Create Vocabulary class from a given vocabulary and its id-word, word-id convert,
see create_vocab() and ``tutorial_tfrecord3.py``.
Parameters
-----------
vocab_file : File containing the vocabulary, where the words are the first
whitespace-separated token on each line (other tokens are ignored) and
the word ids are the corresponding line numbers.
start_word : Special word denoting sentence start.
end_word : Special word denoting sentence end.
unk_word : Special word denoting unknown words.
Attributes
------------
vocab : a dictionary from word to id.
reverse_vocab : a list from id to word.
start_id : int of start id
end_id : int of end id
unk_id : int of unk id
pad_id : int of padding id
Vocab_files
-------------
>>> Look as follow, includes `start_word` , `end_word` but no `unk_word` .
>>> a 969108
>>> <S> 586368
>>> </S> 586368
>>> . 440479
>>> on 213612
>>> of 202290
>>> the 196219
>>> in 182598
>>> with 152984
>>> and 139109
>>> is 97322
"""
def __init__(self,
vocab_file,
start_word="<S>",
end_word="</S>",
unk_word="<UNK>",
pad_word="<PAD>"):
if not tf.gfile.Exists(vocab_file):
tf.logging.fatal("Vocab file %s not found.", vocab_file)
tf.logging.info("Initializing vocabulary from file: %s", vocab_file)
with tf.gfile.GFile(vocab_file, mode="r") as f:
reverse_vocab = list(f.readlines())
reverse_vocab = [line.split()[0] for line in reverse_vocab]
# assert start_word in reverse_vocab
# assert end_word in reverse_vocab
if start_word not in reverse_vocab: # haodong
reverse_vocab.append(start_word)
if end_word not in reverse_vocab:
reverse_vocab.append(end_word)
if unk_word not in reverse_vocab:
reverse_vocab.append(unk_word)
vocab = dict([(x, y) for (y, x) in enumerate(reverse_vocab)])
print(" [TL] Vocabulary from %s : %s %s %s" % (vocab_file, start_word, end_word, unk_word))
print(" vocabulary with %d words (includes start_word, end_word, unk_word)" % len(vocab))
# tf.logging.info(" vocabulary with %d words" % len(vocab))
self.vocab = vocab # vocab[word] = id
self.reverse_vocab = reverse_vocab # reverse_vocab[id] = word
# Save special word ids.
self.start_id = vocab[start_word]
self.end_id = vocab[end_word]
self.unk_id = vocab[unk_word]
self.pad_id = vocab[pad_word]
print(" start_id: %d" % self.start_id)
print(" end_id: %d" % self.end_id)
print(" unk_id: %d" % self.unk_id)
print(" pad_id: %d" % self.pad_id)
def word_to_id(self, word):
"""Returns the integer word id of a word string."""
if word in self.vocab:
return self.vocab[word]
else:
return self.unk_id
def id_to_word(self, word_id):
"""Returns the word string of an integer word id."""
if word_id >= len(self.reverse_vocab):
return self.reverse_vocab[self.unk_id]
else:
return self.reverse_vocab[word_id]
[docs]def process_sentence(sentence, start_word="<S>", end_word="</S>"):
"""Converts a sentence string into a list of string words, add start_word and end_word,
see ``create_vocab()`` and ``tutorial_tfrecord3.py``.
Parameter
---------
sentence : a sentence in string.
start_word : a string or None, if None, non start word will be appended.
end_word : a string or None, if None, non end word will be appended.
Returns
---------
A list of strings; the processed caption.
Examples
-----------
>>> c = "how are you?"
>>> c = tl.nlp.process_sentence(c)
>>> print(c)
... ['<S>', 'how', 'are', 'you', '?', '</S>']
Notes
-------
- You have to install the following package.
- `Installing NLTK <http://www.nltk.org/install.html>`_
- `Installing NLTK data <http://www.nltk.org/data.html>`_
"""
try:
import nltk
except:
raise Exception("Hint : NLTK is required.")
if start_word is not None:
process_sentence = [start_word]
else:
process_sentence = []
process_sentence.extend(nltk.tokenize.word_tokenize(sentence.lower()))
if end_word is not None:
process_sentence.append(end_word)
return process_sentence
[docs]def create_vocab(sentences, word_counts_output_file, min_word_count=1):
"""Creates the vocabulary of word to word_id, see create_vocab() and ``tutorial_tfrecord3.py``.
The vocabulary is saved to disk in a text file of word counts. The id of each
word in the file is its corresponding 0-based line number.
Parameters
------------
sentences : a list of lists of strings.
word_counts_output_file : A string
The file name.
min_word_count : a int
Minimum number of occurrences for a word.
Returns
--------
- tl.nlp.SimpleVocabulary object.
Notes
-------
- See more ``tl.nlp.build_vocab()``
Examples
--------
>>> captions = ["one two , three", "four five five"]
>>> processed_capts = []
>>> for c in captions:
>>> c = tl.nlp.process_sentence(c, start_word="<S>", end_word="</S>")
>>> processed_capts.append(c)
>>> print(processed_capts)
...[['<S>', 'one', 'two', ',', 'three', '</S>'], ['<S>', 'four', 'five', 'five', '</S>']]
>>> tl.nlp.create_vocab(processed_capts, word_counts_output_file='vocab.txt', min_word_count=1)
... [TL] Creating vocabulary.
... Total words: 8
... Words in vocabulary: 8
... Wrote vocabulary file: vocab.txt
>>> vocab = tl.nlp.Vocabulary('vocab.txt', start_word="<S>", end_word="</S>", unk_word="<UNK>")
... INFO:tensorflow:Initializing vocabulary from file: vocab.txt
... [TL] Vocabulary from vocab.txt : <S> </S> <UNK>
... vocabulary with 10 words (includes start_word, end_word, unk_word)
... start_id: 2
... end_id: 3
... unk_id: 9
... pad_id: 0
"""
from collections import Counter
print(" [TL] Creating vocabulary.")
counter = Counter()
for c in sentences:
counter.update(c)
# print('c',c)
print(" Total words: %d" % len(counter))
# Filter uncommon words and sort by descending count.
word_counts = [x for x in counter.items() if x[1] >= min_word_count]
word_counts.sort(key=lambda x: x[1], reverse=True)
word_counts = [("<PAD>", 0)] + word_counts # 1st id should be reserved for padding
# print(word_counts)
print(" Words in vocabulary: %d" % len(word_counts))
# Write out the word counts file.
with tf.gfile.FastGFile(word_counts_output_file, "w") as f:
f.write("\n".join(["%s %d" % (w, c) for w, c in word_counts]))
print(" Wrote vocabulary file: %s" % word_counts_output_file)
# Create the vocabulary dictionary.
reverse_vocab = [x[0] for x in word_counts]
unk_id = len(reverse_vocab)
vocab_dict = dict([(x, y) for (y, x) in enumerate(reverse_vocab)])
vocab = SimpleVocabulary(vocab_dict, unk_id)
return vocab
## Vector representations of words
[docs]def simple_read_words(filename="nietzsche.txt"):
"""Read context from file without any preprocessing.
Parameters
----------
filename : a string
A file path (like .txt file)
Returns
--------
The context in a string
"""
with open(filename, "r") as f:
words = f.read()
return words
[docs]def read_words(filename="nietzsche.txt", replace = ['\n', '<eos>']):
""" File to list format context. Note that, this script can not handle punctuations.
For customized read_words method, see ``tutorial_generate_text.py``.
Parameters
-----------
filename : a string
A file path (like .txt file)
replace : a list
[original string, target string], to disable replace use ['', '']
Returns
--------
The context in a list, split by space by default, and use ``<eos>`` to represent ``\\n``,
e.g. ``[... 'how', 'useful', 'it', "'s" ... ]``.
References
---------------
- `tensorflow.models.rnn.ptb.reader <https://github.com/tensorflow/tensorflow/tree/master/tensorflow/models/rnn/ptb>`_
"""
with tf.gfile.GFile(filename, "r") as f:
try: # python 3.4 or older
context_list = f.read().replace(*replace).split()
except: # python 3.5
f.seek(0)
replace = [x.encode('utf-8') for x in replace]
context_list = f.read().replace(*replace).split()
return context_list
[docs]def read_analogies_file(eval_file='questions-words.txt', word2id={}):
"""Reads through an analogy question file, return its id format.
Parameters
----------
eval_data : a string
The file name.
word2id : a dictionary
Mapping words to unique IDs.
Returns
--------
analogy_questions : a [n, 4] numpy array containing the analogy question's
word ids.
questions_skipped: questions skipped due to unknown words.
Examples
---------
>>> eval_file should be in this format :
>>> : capital-common-countries
>>> Athens Greece Baghdad Iraq
>>> Athens Greece Bangkok Thailand
>>> Athens Greece Beijing China
>>> Athens Greece Berlin Germany
>>> Athens Greece Bern Switzerland
>>> Athens Greece Cairo Egypt
>>> Athens Greece Canberra Australia
>>> Athens Greece Hanoi Vietnam
>>> Athens Greece Havana Cuba
...
>>> words = tl.files.load_matt_mahoney_text8_dataset()
>>> data, count, dictionary, reverse_dictionary = \
tl.nlp.build_words_dataset(words, vocabulary_size, True)
>>> analogy_questions = tl.nlp.read_analogies_file( \
eval_file='questions-words.txt', word2id=dictionary)
>>> print(analogy_questions)
... [[ 3068 1248 7161 1581]
... [ 3068 1248 28683 5642]
... [ 3068 1248 3878 486]
... ...,
... [ 1216 4309 19982 25506]
... [ 1216 4309 3194 8650]
... [ 1216 4309 140 312]]
"""
questions = []
questions_skipped = 0
with open(eval_file, "rb") as analogy_f:
for line in analogy_f:
if line.startswith(b":"): # Skip comments.
continue
words = line.strip().lower().split(b" ") # lowercase
ids = [word2id.get(w.strip()) for w in words]
if None in ids or len(ids) != 4:
questions_skipped += 1
else:
questions.append(np.array(ids))
print("Eval analogy file: ", eval_file)
print("Questions: ", len(questions))
print("Skipped: ", questions_skipped)
analogy_questions = np.array(questions, dtype=np.int32)
return analogy_questions
[docs]def build_vocab(data):
"""Build vocabulary.
Given the context in list format.
Return the vocabulary, which is a dictionary for word to id.
e.g. {'campbell': 2587, 'atlantic': 2247, 'aoun': 6746 .... }
Parameters
----------
data : a list of string
the context in list format
Returns
--------
word_to_id : a dictionary
mapping words to unique IDs. e.g. {'campbell': 2587, 'atlantic': 2247, 'aoun': 6746 .... }
References
---------------
- `tensorflow.models.rnn.ptb.reader <https://github.com/tensorflow/tensorflow/tree/master/tensorflow/models/rnn/ptb>`_
Examples
--------
>>> data_path = os.getcwd() + '/simple-examples/data'
>>> train_path = os.path.join(data_path, "ptb.train.txt")
>>> word_to_id = build_vocab(read_txt_words(train_path))
"""
# data = _read_words(filename)
counter = collections.Counter(data)
# print('counter', counter) # dictionary for the occurrence number of each word, e.g. 'banknote': 1, 'photography': 1, 'kia': 1
count_pairs = sorted(counter.items(), key=lambda x: (-x[1], x[0]))
# print('count_pairs',count_pairs) # convert dictionary to list of tuple, e.g. ('ssangyong', 1), ('swapo', 1), ('wachter', 1)
words, _ = list(zip(*count_pairs))
word_to_id = dict(zip(words, range(len(words))))
# print(words) # list of words
# print(word_to_id) # dictionary for word to id, e.g. 'campbell': 2587, 'atlantic': 2247, 'aoun': 6746
return word_to_id
[docs]def build_reverse_dictionary(word_to_id):
"""Given a dictionary for converting word to integer id.
Returns a reverse dictionary for converting a id to word.
Parameters
----------
word_to_id : dictionary
mapping words to unique ids
Returns
--------
reverse_dictionary : a dictionary
mapping ids to words
"""
reverse_dictionary = dict(zip(word_to_id.values(), word_to_id.keys()))
return reverse_dictionary
[docs]def build_words_dataset(words=[], vocabulary_size=50000, printable=True, unk_key = 'UNK'):
"""Build the words dictionary and replace rare words with 'UNK' token.
The most common word has the smallest integer id.
Parameters
----------
words : a list of string or byte
The context in list format. You may need to do preprocessing on the words,
such as lower case, remove marks etc.
vocabulary_size : an int
The maximum vocabulary size, limiting the vocabulary size.
Then the script replaces rare words with 'UNK' token.
printable : boolean
Whether to print the read vocabulary size of the given words.
unk_key : a string
Unknown words = unk_key
Returns
--------
data : a list of integer
The context in a list of ids
count : a list of tuple and list
count[0] is a list : the number of rare words\n
count[1:] are tuples : the number of occurrence of each word\n
e.g. [['UNK', 418391], (b'the', 1061396), (b'of', 593677), (b'and', 416629), (b'one', 411764)]
dictionary : a dictionary
word_to_id, mapping words to unique IDs.
reverse_dictionary : a dictionary
id_to_word, mapping id to unique word.
Examples
--------
>>> words = tl.files.load_matt_mahoney_text8_dataset()
>>> vocabulary_size = 50000
>>> data, count, dictionary, reverse_dictionary = tl.nlp.build_words_dataset(words, vocabulary_size)
References
-----------------
- `tensorflow/examples/tutorials/word2vec/word2vec_basic.py <https://github.com/tensorflow/tensorflow/blob/r0.7/tensorflow/examples/tutorials/word2vec/word2vec_basic.py>`_
"""
import collections
count = [[unk_key, -1]]
count.extend(collections.Counter(words).most_common(vocabulary_size - 1))
dictionary = dict()
for word, _ in count:
dictionary[word] = len(dictionary)
data = list()
unk_count = 0
for word in words:
if word in dictionary:
index = dictionary[word]
else:
index = 0 # dictionary['UNK']
unk_count += 1
data.append(index)
count[0][1] = unk_count
reverse_dictionary = dict(zip(dictionary.values(), dictionary.keys()))
if printable:
print('Real vocabulary size %d' % len(collections.Counter(words).keys()))
print('Limited vocabulary size {}'.format(vocabulary_size))
assert len(collections.Counter(words).keys()) >= vocabulary_size , \
"the limited vocabulary_size must be less than or equal to the read vocabulary_size"
return data, count, dictionary, reverse_dictionary
[docs]def words_to_word_ids(data=[], word_to_id={}, unk_key = 'UNK'):
"""Given a context (words) in list format and the vocabulary,
Returns a list of IDs to represent the context.
Parameters
----------
data : a list of string or byte
the context in list format
word_to_id : a dictionary
mapping words to unique IDs.
unk_key : a string
Unknown words = unk_key
Returns
--------
A list of IDs to represent the context.
Examples
--------
>>> words = tl.files.load_matt_mahoney_text8_dataset()
>>> vocabulary_size = 50000
>>> data, count, dictionary, reverse_dictionary = \
... tl.nlp.build_words_dataset(words, vocabulary_size, True)
>>> context = [b'hello', b'how', b'are', b'you']
>>> ids = tl.nlp.words_to_word_ids(words, dictionary)
>>> context = tl.nlp.word_ids_to_words(ids, reverse_dictionary)
>>> print(ids)
... [6434, 311, 26, 207]
>>> print(context)
... [b'hello', b'how', b'are', b'you']
References
---------------
- `tensorflow.models.rnn.ptb.reader <https://github.com/tensorflow/tensorflow/tree/master/tensorflow/models/rnn/ptb>`_
"""
# if isinstance(data[0], six.string_types):
# print(type(data[0]))
# # exit()
# print(data[0])
# print(word_to_id)
# return [word_to_id[str(word)] for word in data]
# else:
word_ids = []
for word in data:
if word_to_id.get(word) is not None:
word_ids.append(word_to_id[word])
else:
word_ids.append(word_to_id[unk_key])
return word_ids
# return [word_to_id[word] for word in data] # this one
# if isinstance(data[0], str):
# # print('is a string object')
# return [word_to_id[word] for word in data]
# else:#if isinstance(s, bytes):
# # print('is a unicode object')
# # print(data[0])
# return [word_to_id[str(word)] f
[docs]def word_ids_to_words(data, id_to_word):
"""Given a context (ids) in list format and the vocabulary,
Returns a list of words to represent the context.
Parameters
----------
data : a list of integer
the context in list format
id_to_word : a dictionary
mapping id to unique word.
Returns
--------
A list of string or byte to represent the context.
Examples
---------
>>> see words_to_word_ids
"""
return [id_to_word[i] for i in data]
[docs]def save_vocab(count=[], name='vocab.txt'):
"""Save the vocabulary to a file so the model can be reloaded.
Parameters
----------
count : a list of tuple and list
count[0] is a list : the number of rare words\n
count[1:] are tuples : the number of occurrence of each word\n
e.g. [['UNK', 418391], (b'the', 1061396), (b'of', 593677), (b'and', 416629), (b'one', 411764)]
Examples
---------
>>> words = tl.files.load_matt_mahoney_text8_dataset()
>>> vocabulary_size = 50000
>>> data, count, dictionary, reverse_dictionary = \
... tl.nlp.build_words_dataset(words, vocabulary_size, True)
>>> tl.nlp.save_vocab(count, name='vocab_text8.txt')
>>> vocab_text8.txt
... UNK 418391
... the 1061396
... of 593677
... and 416629
... one 411764
... in 372201
... a 325873
... to 316376
"""
pwd = os.getcwd()
vocabulary_size = len(count)
with open(os.path.join(pwd, name), "w") as f:
for i in xrange(vocabulary_size):
f.write("%s %d\n" % (tf.compat.as_text(count[i][0]), count[i][1]))
print("%d vocab saved to %s in %s" % (vocabulary_size, name, pwd))
## Functions for translation
[docs]def basic_tokenizer(sentence, _WORD_SPLIT=re.compile(b"([.,!?\"':;)(])")):
"""Very basic tokenizer: split the sentence into a list of tokens.
Parameters
-----------
sentence : tensorflow.python.platform.gfile.GFile Object
_WORD_SPLIT : regular expression for word spliting.
Examples
--------
>>> see create_vocabulary
>>> from tensorflow.python.platform import gfile
>>> train_path = "wmt/giga-fren.release2"
>>> with gfile.GFile(train_path + ".en", mode="rb") as f:
>>> for line in f:
>>> tokens = tl.nlp.basic_tokenizer(line)
>>> print(tokens)
>>> exit()
... [b'Changing', b'Lives', b'|', b'Changing', b'Society', b'|', b'How',
... b'It', b'Works', b'|', b'Technology', b'Drives', b'Change', b'Home',
... b'|', b'Concepts', b'|', b'Teachers', b'|', b'Search', b'|', b'Overview',
... b'|', b'Credits', b'|', b'HHCC', b'Web', b'|', b'Reference', b'|',
... b'Feedback', b'Virtual', b'Museum', b'of', b'Canada', b'Home', b'Page']
References
----------
- Code from ``/tensorflow/models/rnn/translation/data_utils.py``
"""
words = []
sentence = tf.compat.as_bytes(sentence)
for space_separated_fragment in sentence.strip().split():
words.extend(re.split(_WORD_SPLIT, space_separated_fragment))
return [w for w in words if w]
[docs]def create_vocabulary(vocabulary_path, data_path, max_vocabulary_size,
tokenizer=None, normalize_digits=True,
_DIGIT_RE=re.compile(br"\d"),
_START_VOCAB=[b"_PAD", b"_GO", b"_EOS", b"_UNK"]):
"""Create vocabulary file (if it does not exist yet) from data file.
Data file is assumed to contain one sentence per line. Each sentence is
tokenized and digits are normalized (if normalize_digits is set).
Vocabulary contains the most-frequent tokens up to max_vocabulary_size.
We write it to vocabulary_path in a one-token-per-line format, so that later
token in the first line gets id=0, second line gets id=1, and so on.
Parameters
-----------
vocabulary_path : path where the vocabulary will be created.
data_path : data file that will be used to create vocabulary.
max_vocabulary_size : limit on the size of the created vocabulary.
tokenizer : a function to use to tokenize each data sentence.
if None, basic_tokenizer will be used.
normalize_digits : Boolean
if true, all digits are replaced by 0s.
References
----------
- Code from ``/tensorflow/models/rnn/translation/data_utils.py``
"""
if not gfile.Exists(vocabulary_path):
print("Creating vocabulary %s from data %s" % (vocabulary_path, data_path))
vocab = {}
with gfile.GFile(data_path, mode="rb") as f:
counter = 0
for line in f:
counter += 1
if counter % 100000 == 0:
print(" processing line %d" % counter)
tokens = tokenizer(line) if tokenizer else basic_tokenizer(line)
for w in tokens:
word = re.sub(_DIGIT_RE, b"0", w) if normalize_digits else w
if word in vocab:
vocab[word] += 1
else:
vocab[word] = 1
vocab_list = _START_VOCAB + sorted(vocab, key=vocab.get, reverse=True)
if len(vocab_list) > max_vocabulary_size:
vocab_list = vocab_list[:max_vocabulary_size]
with gfile.GFile(vocabulary_path, mode="wb") as vocab_file:
for w in vocab_list:
vocab_file.write(w + b"\n")
else:
print("Vocabulary %s from data %s exists" % (vocabulary_path, data_path))
[docs]def initialize_vocabulary(vocabulary_path):
"""Initialize vocabulary from file, return the word_to_id (dictionary)
and id_to_word (list).
We assume the vocabulary is stored one-item-per-line, so a file:\n
dog\n
cat\n
will result in a vocabulary {"dog": 0, "cat": 1}, and this function will
also return the reversed-vocabulary ["dog", "cat"].
Parameters
-----------
vocabulary_path : path to the file containing the vocabulary.
Returns
--------
vocab : a dictionary
Word to id. A dictionary mapping string to integers.
rev_vocab : a list
Id to word. The reversed vocabulary (a list, which reverses the vocabulary mapping).
Examples
---------
>>> Assume 'test' contains
... dog
... cat
... bird
>>> vocab, rev_vocab = tl.nlp.initialize_vocabulary("test")
>>> print(vocab)
>>> {b'cat': 1, b'dog': 0, b'bird': 2}
>>> print(rev_vocab)
>>> [b'dog', b'cat', b'bird']
Raises
-------
ValueError : if the provided vocabulary_path does not exist.
"""
if gfile.Exists(vocabulary_path):
rev_vocab = []
with gfile.GFile(vocabulary_path, mode="rb") as f:
rev_vocab.extend(f.readlines())
rev_vocab = [tf.compat.as_bytes(line.strip()) for line in rev_vocab]
vocab = dict([(x, y) for (y, x) in enumerate(rev_vocab)])
return vocab, rev_vocab
else:
raise ValueError("Vocabulary file %s not found.", vocabulary_path)
[docs]def sentence_to_token_ids(sentence, vocabulary,
tokenizer=None, normalize_digits=True,
UNK_ID=3, _DIGIT_RE=re.compile(br"\d")):
"""Convert a string to list of integers representing token-ids.
For example, a sentence "I have a dog" may become tokenized into
["I", "have", "a", "dog"] and with vocabulary {"I": 1, "have": 2,
"a": 4, "dog": 7"} this function will return [1, 2, 4, 7].
Parameters
-----------
sentence : tensorflow.python.platform.gfile.GFile Object
The sentence in bytes format to convert to token-ids.\n
see basic_tokenizer(), data_to_token_ids()
vocabulary : a dictionary mapping tokens to integers.
tokenizer : a function to use to tokenize each sentence;
If None, basic_tokenizer will be used.
normalize_digits : Boolean
If true, all digits are replaced by 0s.
Returns
--------
A list of integers, the token-ids for the sentence.
"""
if tokenizer:
words = tokenizer(sentence)
else:
words = basic_tokenizer(sentence)
if not normalize_digits:
return [vocabulary.get(w, UNK_ID) for w in words]
# Normalize digits by 0 before looking words up in the vocabulary.
return [vocabulary.get(re.sub(_DIGIT_RE, b"0", w), UNK_ID) for w in words]
[docs]def data_to_token_ids(data_path, target_path, vocabulary_path,
tokenizer=None, normalize_digits=True,
UNK_ID=3, _DIGIT_RE=re.compile(br"\d")):
"""Tokenize data file and turn into token-ids using given vocabulary file.
This function loads data line-by-line from data_path, calls the above
sentence_to_token_ids, and saves the result to target_path. See comment
for sentence_to_token_ids on the details of token-ids format.
Parameters
-----------
data_path : path to the data file in one-sentence-per-line format.
target_path : path where the file with token-ids will be created.
vocabulary_path : path to the vocabulary file.
tokenizer : a function to use to tokenize each sentence;
if None, basic_tokenizer will be used.
normalize_digits : Boolean; if true, all digits are replaced by 0s.
References
----------
- Code from ``/tensorflow/models/rnn/translation/data_utils.py``
"""
if not gfile.Exists(target_path):
print("Tokenizing data in %s" % data_path)
vocab, _ = initialize_vocabulary(vocabulary_path)
with gfile.GFile(data_path, mode="rb") as data_file:
with gfile.GFile(target_path, mode="w") as tokens_file:
counter = 0
for line in data_file:
counter += 1
if counter % 100000 == 0:
print(" tokenizing line %d" % counter)
token_ids = sentence_to_token_ids(line, vocab, tokenizer,
normalize_digits, UNK_ID=UNK_ID,
_DIGIT_RE=_DIGIT_RE)
tokens_file.write(" ".join([str(tok) for tok in token_ids]) + "\n")
else:
print("Target path %s exists" % target_path)
## Metric
import subprocess
import tempfile
from six.moves import urllib
[docs]def moses_multi_bleu(hypotheses, references, lowercase=False): # tl.nlp
"""Calculate the bleu score for hypotheses and references
using the MOSES ulti-bleu.perl script.
Parameters
------------
hypotheses : A numpy array of strings where each string is a single example.
references : A numpy array of strings where each string is a single example.
lowercase : If true, pass the "-lc" flag to the multi-bleu script
Examples
---------
>>> hypotheses = ["a bird is flying on the sky"]
>>> references = ["two birds are flying on the sky", "a bird is on the top of the tree", "an airplane is on the sky",]
>>> score = tl.nlp.moses_multi_bleu(hypotheses, references)
Returns
--------
The BLEU score as a float32 value.
References
----------
- `Google/seq2seq/metric/bleu <https://github.com/google/seq2seq>`_
"""
if np.size(hypotheses) == 0:
return np.float32(0.0)
# Get MOSES multi-bleu script
try:
multi_bleu_path, _ = urllib.request.urlretrieve(
"https://raw.githubusercontent.com/moses-smt/mosesdecoder/"
"master/scripts/generic/multi-bleu.perl")
os.chmod(multi_bleu_path, 0o755)
except: #pylint: disable=W0702
tf.logging.info("Unable to fetch multi-bleu.perl script, using local.")
metrics_dir = os.path.dirname(os.path.realpath(__file__))
bin_dir = os.path.abspath(os.path.join(metrics_dir, "..", "..", "bin"))
multi_bleu_path = os.path.join(bin_dir, "tools/multi-bleu.perl")
# Dump hypotheses and references to tempfiles
hypothesis_file = tempfile.NamedTemporaryFile()
hypothesis_file.write("\n".join(hypotheses).encode("utf-8"))
hypothesis_file.write(b"\n")
hypothesis_file.flush()
reference_file = tempfile.NamedTemporaryFile()
reference_file.write("\n".join(references).encode("utf-8"))
reference_file.write(b"\n")
reference_file.flush()
# Calculate BLEU using multi-bleu script
with open(hypothesis_file.name, "r") as read_pred:
bleu_cmd = [multi_bleu_path]
if lowercase:
bleu_cmd += ["-lc"]
bleu_cmd += [reference_file.name]
try:
bleu_out = subprocess.check_output(
bleu_cmd, stdin=read_pred, stderr=subprocess.STDOUT)
bleu_out = bleu_out.decode("utf-8")
bleu_score = re.search(r"BLEU = (.+?),", bleu_out).group(1)
bleu_score = float(bleu_score)
except subprocess.CalledProcessError as error:
if error.output is not None:
tf.logging.warning("multi-bleu.perl script returned non-zero exit code")
tf.logging.warning(error.output)
bleu_score = np.float32(0.0)
# Close temp files
hypothesis_file.close()
reference_file.close()
return np.float32(bleu_score)