#! /usr/bin/python
# -*- coding: utf8 -*-
import tensorflow as tf
import os
import numpy as np
import re
import sys
import tarfile
import gzip
import zipfile
from . import visualize
from . import nlp
import pickle
from six.moves import urllib
from six.moves import cPickle
from six.moves import zip
from tensorflow.python.platform import gfile
## Load dataset functions
[docs]def load_mnist_dataset(shape=(-1,784), path="data/mnist/"):
"""Automatically download MNIST dataset
and return the training, validation and test set with 50000, 10000 and 10000
digit images respectively.
Parameters
----------
shape : tuple
The shape of digit images, defaults is (-1,784)
path : string
The path that the data is downloaded to, defaults is ``data/mnist/``.
Examples
--------
>>> X_train, y_train, X_val, y_val, X_test, y_test = tl.files.load_mnist_dataset(shape=(-1,784))
>>> X_train, y_train, X_val, y_val, X_test, y_test = tl.files.load_mnist_dataset(shape=(-1, 28, 28, 1))
"""
# We first define functions for loading MNIST images and labels.
# For convenience, they also download the requested files if needed.
def load_mnist_images(path, filename):
filepath = maybe_download_and_extract(filename, path, 'http://yann.lecun.com/exdb/mnist/')
print(filepath)
# Read the inputs in Yann LeCun's binary format.
with gzip.open(filepath, 'rb') as f:
data = np.frombuffer(f.read(), np.uint8, offset=16)
# The inputs are vectors now, we reshape them to monochrome 2D images,
# following the shape convention: (examples, channels, rows, columns)
data = data.reshape(shape)
# The inputs come as bytes, we convert them to float32 in range [0,1].
# (Actually to range [0, 255/256], for compatibility to the version
# provided at http://deeplearning.net/data/mnist/mnist.pkl.gz.)
return data / np.float32(256)
def load_mnist_labels(path, filename):
filepath = maybe_download_and_extract(filename, path, 'http://yann.lecun.com/exdb/mnist/')
# Read the labels in Yann LeCun's binary format.
with gzip.open(filepath, 'rb') as f:
data = np.frombuffer(f.read(), np.uint8, offset=8)
# The labels are vectors of integers now, that's exactly what we want.
return data
# Download and read the training and test set images and labels.
print("Load or Download MNIST > {}".format(path))
X_train = load_mnist_images(path, 'train-images-idx3-ubyte.gz')
y_train = load_mnist_labels(path, 'train-labels-idx1-ubyte.gz')
X_test = load_mnist_images(path, 't10k-images-idx3-ubyte.gz')
y_test = load_mnist_labels(path, 't10k-labels-idx1-ubyte.gz')
# We reserve the last 10000 training examples for validation.
X_train, X_val = X_train[:-10000], X_train[-10000:]
y_train, y_val = y_train[:-10000], y_train[-10000:]
# We just return all the arrays in order, as expected in main().
# (It doesn't matter how we do this as long as we can read them again.)
X_train = np.asarray(X_train, dtype=np.float32)
y_train = np.asarray(y_train, dtype=np.int32)
X_val = np.asarray(X_val, dtype=np.float32)
y_val = np.asarray(y_val, dtype=np.int32)
X_test = np.asarray(X_test, dtype=np.float32)
y_test = np.asarray(y_test, dtype=np.int32)
return X_train, y_train, X_val, y_val, X_test, y_test
[docs]def load_cifar10_dataset(shape=(-1, 32, 32, 3), path='data/cifar10/', plotable=False, second=3):
"""The CIFAR-10 dataset consists of 60000 32x32 colour images in 10 classes, with
6000 images per class. There are 50000 training images and 10000 test images.
The dataset is divided into five training batches and one test batch, each with
10000 images. The test batch contains exactly 1000 randomly-selected images from
each class. The training batches contain the remaining images in random order,
but some training batches may contain more images from one class than another.
Between them, the training batches contain exactly 5000 images from each class.
Parameters
----------
shape : tupe
The shape of digit images: e.g. (-1, 3, 32, 32) , (-1, 32, 32, 3) , (-1, 32, 32, 3)
plotable : True, False
Whether to plot some image examples.
second : int
If ``plotable`` is True, ``second`` is the display time.
path : string
The path that the data is downloaded to, defaults is ``data/cifar10/``.
Examples
--------
>>> X_train, y_train, X_test, y_test = tl.files.load_cifar10_dataset(shape=(-1, 32, 32, 3), plotable=True)
References
----------
- `CIFAR website <https://www.cs.toronto.edu/~kriz/cifar.html>`_
- `Data download link <https://www.cs.toronto.edu/~kriz/cifar-10-python.tar.gz>`_
- `Code references <https://teratail.com/questions/28932>`_
"""
print("Load or Download cifar10 > {}".format(path))
#Helper function to unpickle the data
def unpickle(file):
fp = open(file, 'rb')
if sys.version_info.major == 2:
data = pickle.load(fp)
elif sys.version_info.major == 3:
data = pickle.load(fp, encoding='latin-1')
fp.close()
return data
filename = 'cifar-10-python.tar.gz'
url = 'https://www.cs.toronto.edu/~kriz/'
#Download and uncompress file
maybe_download_and_extract(filename, path, url, extract=True)
#Unpickle file and fill in data
X_train = None
y_train = []
for i in range(1,6):
data_dic = unpickle(os.path.join(path, 'cifar-10-batches-py/', "data_batch_{}".format(i)))
if i == 1:
X_train = data_dic['data']
else:
X_train = np.vstack((X_train, data_dic['data']))
y_train += data_dic['labels']
test_data_dic = unpickle(os.path.join(path, 'cifar-10-batches-py/', "test_batch"))
X_test = test_data_dic['data']
y_test = np.array(test_data_dic['labels'])
if shape == (-1, 3, 32, 32):
X_test = X_test.reshape(shape)
X_train = X_train.reshape(shape)
elif shape == (-1, 32, 32, 3):
X_test = X_test.reshape(shape, order='F')
X_train = X_train.reshape(shape, order='F')
X_test = np.transpose(X_test, (0, 2, 1, 3))
X_train = np.transpose(X_train, (0, 2, 1, 3))
else:
X_test = X_test.reshape(shape)
X_train = X_train.reshape(shape)
y_train = np.array(y_train)
if plotable == True:
print('\nCIFAR-10')
import matplotlib.pyplot as plt
fig = plt.figure(1)
print('Shape of a training image: X_train[0]',X_train[0].shape)
plt.ion() # interactive mode
count = 1
for row in range(10):
for col in range(10):
a = fig.add_subplot(10, 10, count)
if shape == (-1, 3, 32, 32):
# plt.imshow(X_train[count-1], interpolation='nearest')
plt.imshow(np.transpose(X_train[count-1], (1, 2, 0)), interpolation='nearest')
# plt.imshow(np.transpose(X_train[count-1], (2, 1, 0)), interpolation='nearest')
elif shape == (-1, 32, 32, 3):
plt.imshow(X_train[count-1], interpolation='nearest')
# plt.imshow(np.transpose(X_train[count-1], (1, 0, 2)), interpolation='nearest')
else:
raise Exception("Do not support the given 'shape' to plot the image examples")
plt.gca().xaxis.set_major_locator(plt.NullLocator()) # 不显示刻度(tick)
plt.gca().yaxis.set_major_locator(plt.NullLocator())
count = count + 1
plt.draw() # interactive mode
plt.pause(3) # interactive mode
print("X_train:",X_train.shape)
print("y_train:",y_train.shape)
print("X_test:",X_test.shape)
print("y_test:",y_test.shape)
X_train = np.asarray(X_train, dtype=np.float32)
X_test = np.asarray(X_test, dtype=np.float32)
y_train = np.asarray(y_train, dtype=np.int32)
y_test = np.asarray(y_test, dtype=np.int32)
return X_train, y_train, X_test, y_test
[docs]def load_ptb_dataset(path='data/ptb/'):
"""Penn TreeBank (PTB) dataset is used in many LANGUAGE MODELING papers,
including "Empirical Evaluation and Combination of Advanced Language
Modeling Techniques", "Recurrent Neural Network Regularization".
It consists of 929k training words, 73k validation words, and 82k test
words. It has 10k words in its vocabulary.
Parameters
----------
path : : string
The path that the data is downloaded to, defaults is ``data/ptb/``.
Returns
--------
train_data, valid_data, test_data, vocabulary size
Examples
--------
>>> train_data, valid_data, test_data, vocab_size = tl.files.load_ptb_dataset()
References
---------------
- ``tensorflow.models.rnn.ptb import reader``
- `Manual download <http://www.fit.vutbr.cz/~imikolov/rnnlm/simple-examples.tgz>`_
"""
print("Load or Download Penn TreeBank (PTB) dataset > {}".format(path))
#Maybe dowload and uncompress tar, or load exsisting files
filename = 'simple-examples.tgz'
url = 'http://www.fit.vutbr.cz/~imikolov/rnnlm/'
maybe_download_and_extract(filename, path, url, extract=True)
data_path = os.path.join(path, 'simple-examples', 'data')
train_path = os.path.join(data_path, "ptb.train.txt")
valid_path = os.path.join(data_path, "ptb.valid.txt")
test_path = os.path.join(data_path, "ptb.test.txt")
word_to_id = nlp.build_vocab(nlp.read_words(train_path))
train_data = nlp.words_to_word_ids(nlp.read_words(train_path), word_to_id)
valid_data = nlp.words_to_word_ids(nlp.read_words(valid_path), word_to_id)
test_data = nlp.words_to_word_ids(nlp.read_words(test_path), word_to_id)
vocabulary = len(word_to_id)
# print(nlp.read_words(train_path)) # ... 'according', 'to', 'mr.', '<unk>', '<eos>']
# print(train_data) # ... 214, 5, 23, 1, 2]
# print(word_to_id) # ... 'beyond': 1295, 'anti-nuclear': 9599, 'trouble': 1520, '<eos>': 2 ... }
# print(vocabulary) # 10000
# exit()
return train_data, valid_data, test_data, vocabulary
[docs]def load_matt_mahoney_text8_dataset(path='data/mm_test8/'):
"""Download a text file from Matt Mahoney's website
if not present, and make sure it's the right size.
Extract the first file enclosed in a zip file as a list of words.
This dataset can be used for Word Embedding.
Parameters
----------
path : : string
The path that the data is downloaded to, defaults is ``data/mm_test8/``.
Returns
--------
word_list : a list
a list of string (word).\n
e.g. [.... 'their', 'families', 'who', 'were', 'expelled', 'from', 'jerusalem', ...]
Examples
--------
>>> words = tl.files.load_matt_mahoney_text8_dataset()
>>> print('Data size', len(words))
"""
print("Load or Download matt_mahoney_text8 Dataset> {}".format(path))
filename = 'text8.zip'
url = 'http://mattmahoney.net/dc/'
maybe_download_and_extract(filename, path, url, expected_bytes=31344016)
with zipfile.ZipFile(os.path.join(path, filename)) as f:
word_list = f.read(f.namelist()[0]).split()
for idx, word in enumerate(word_list):
word_list[idx] = word_list[idx].decode()
return word_list
[docs]def load_imdb_dataset(path='data/imdb/', nb_words=None, skip_top=0,
maxlen=None, test_split=0.2, seed=113,
start_char=1, oov_char=2, index_from=3):
"""Load IMDB dataset
Parameters
----------
path : : string
The path that the data is downloaded to, defaults is ``data/imdb/``.
Examples
--------
>>> X_train, y_train, X_test, y_test = tl.files.load_imdb_dataset(
... nb_words=20000, test_split=0.2)
>>> print('X_train.shape', X_train.shape)
... (20000,) [[1, 62, 74, ... 1033, 507, 27],[1, 60, 33, ... 13, 1053, 7]..]
>>> print('y_train.shape', y_train.shape)
... (20000,) [1 0 0 ..., 1 0 1]
References
-----------
- `Modified from keras. <https://github.com/fchollet/keras/blob/master/keras/datasets/imdb.py>`_
"""
filename = "imdb.pkl"
url = 'https://s3.amazonaws.com/text-datasets/'
maybe_download_and_extract(filename, path, url)
if filename.endswith(".gz"):
f = gzip.open(os.path.join(path, filename), 'rb')
else:
f = open(os.path.join(path, filename), 'rb')
X, labels = cPickle.load(f)
f.close()
np.random.seed(seed)
np.random.shuffle(X)
np.random.seed(seed)
np.random.shuffle(labels)
if start_char is not None:
X = [[start_char] + [w + index_from for w in x] for x in X]
elif index_from:
X = [[w + index_from for w in x] for x in X]
if maxlen:
new_X = []
new_labels = []
for x, y in zip(X, labels):
if len(x) < maxlen:
new_X.append(x)
new_labels.append(y)
X = new_X
labels = new_labels
if not X:
raise Exception('After filtering for sequences shorter than maxlen=' +
str(maxlen) + ', no sequence was kept. '
'Increase maxlen.')
if not nb_words:
nb_words = max([max(x) for x in X])
# by convention, use 2 as OOV word
# reserve 'index_from' (=3 by default) characters: 0 (padding), 1 (start), 2 (OOV)
if oov_char is not None:
X = [[oov_char if (w >= nb_words or w < skip_top) else w for w in x] for x in X]
else:
nX = []
for x in X:
nx = []
for w in x:
if (w >= nb_words or w < skip_top):
nx.append(w)
nX.append(nx)
X = nX
X_train = np.array(X[:int(len(X) * (1 - test_split))])
y_train = np.array(labels[:int(len(X) * (1 - test_split))])
X_test = np.array(X[int(len(X) * (1 - test_split)):])
y_test = np.array(labels[int(len(X) * (1 - test_split)):])
return X_train, y_train, X_test, y_test
[docs]def load_nietzsche_dataset(path='data/nietzsche/'):
"""Load Nietzsche dataset.
Returns a string.
Parameters
----------
path : string
The path that the data is downloaded to, defaults is ``data/nietzsche/``.
Examples
--------
>>> see tutorial_generate_text.py
>>> words = tl.files.load_nietzsche_dataset()
>>> words = basic_clean_str(words)
>>> words = words.split()
"""
print("Load or Download nietzsche dataset > {}".format(path))
filename = "nietzsche.txt"
url = 'https://s3.amazonaws.com/text-datasets/'
filepath = maybe_download_and_extract(filename, path, url)
with open(filepath, "r") as f:
words = f.read()
return words
[docs]def load_wmt_en_fr_dataset(path='data/wmt_en_fr/'):
"""It will download English-to-French translation data from the WMT'15
Website (10^9-French-English corpus), and the 2013 news test from
the same site as development set.
Returns the directories of training data and test data.
Parameters
----------
path : string
The path that the data is downloaded to, defaults is ``data/wmt_en_fr/``.
References
----------
- Code modified from /tensorflow/models/rnn/translation/data_utils.py
Notes
-----
Usually, it will take a long time to download this dataset.
"""
# URLs for WMT data.
_WMT_ENFR_TRAIN_URL = "http://www.statmt.org/wmt10/"
_WMT_ENFR_DEV_URL = "http://www.statmt.org/wmt15/"
def gunzip_file(gz_path, new_path):
"""Unzips from gz_path into new_path."""
print("Unpacking %s to %s" % (gz_path, new_path))
with gzip.open(gz_path, "rb") as gz_file:
with open(new_path, "wb") as new_file:
for line in gz_file:
new_file.write(line)
def get_wmt_enfr_train_set(path):
"""Download the WMT en-fr training corpus to directory unless it's there."""
filename = "training-giga-fren.tar"
maybe_download_and_extract(filename, path, _WMT_ENFR_TRAIN_URL, extract=True)
train_path = os.path.join(path, "giga-fren.release2.fixed")
gunzip_file(train_path + ".fr.gz", train_path + ".fr")
gunzip_file(train_path + ".en.gz", train_path + ".en")
return train_path
def get_wmt_enfr_dev_set(path):
"""Download the WMT en-fr training corpus to directory unless it's there."""
filename = "dev-v2.tgz"
dev_file = maybe_download_and_extract(filename, path, _WMT_ENFR_DEV_URL, extract=False)
dev_name = "newstest2013"
dev_path = os.path.join(path, "newstest2013")
if not (gfile.Exists(dev_path + ".fr") and gfile.Exists(dev_path + ".en")):
print("Extracting tgz file %s" % dev_file)
with tarfile.open(dev_file, "r:gz") as dev_tar:
fr_dev_file = dev_tar.getmember("dev/" + dev_name + ".fr")
en_dev_file = dev_tar.getmember("dev/" + dev_name + ".en")
fr_dev_file.name = dev_name + ".fr" # Extract without "dev/" prefix.
en_dev_file.name = dev_name + ".en"
dev_tar.extract(fr_dev_file, path)
dev_tar.extract(en_dev_file, path)
return dev_path
print("Load or Download WMT English-to-French translation > {}".format(path))
train_path = get_wmt_enfr_train_set(path)
dev_path = get_wmt_enfr_dev_set(path)
return train_path, dev_path
[docs]def load_flickr25k_dataset(tag='sky', path="data/flickr25k", n_threads=50, printable=False):
"""Returns a list of images by a given tag from Flick25k dataset,
it will download Flickr25k from `the official website <http://press.liacs.nl/mirflickr/mirdownload.html>`_
at the first time you use it.
Parameters
------------
tag : string or None
If you want to get images with tag, use string like 'dog', 'red', see `Flickr Search <https://www.flickr.com/search/>`_.
If you want to get all images, set to ``None``.
path : string
The path that the data is downloaded to, defaults is ``data/flickr25k/``.
n_threads : int, number of thread to read image.
printable : bool, print infomation when reading images, default is ``False``.
Examples
-----------
- Get images with tag of sky
>>> images = tl.files.load_flickr25k_dataset(tag='sky')
- Get all images
>>> images = tl.files.load_flickr25k_dataset(tag=None, n_threads=100, printable=True)
"""
filename = 'mirflickr25k.zip'
url = 'http://press.liacs.nl/mirflickr/mirflickr25k/'
## download dataset
if folder_exists(path+"/mirflickr") is False:
print("[*] Flickr25k is nonexistent in {}".format(path))
maybe_download_and_extract(filename, path, url, extract=True)
del_file(path+'/'+filename)
## return images by the given tag.
# 1. image path list
folder_imgs = path+"/mirflickr"
path_imgs = load_file_list(path=folder_imgs, regx='\\.jpg', printable=False)
path_imgs.sort(key=natural_keys)
# print(path_imgs[0:10])
# 2. tag path list
folder_tags = path+"/mirflickr/meta/tags"
path_tags = load_file_list(path=folder_tags, regx='\\.txt', printable=False)
path_tags.sort(key=natural_keys)
# print(path_tags[0:10])
# 3. select images
if tag is None:
print("[Flickr25k] reading all images")
else:
print("[Flickr25k] reading images with tag: {}".format(tag))
images_list = []
for idx in range(0, len(path_tags)):
tags = read_file(folder_tags+'/'+path_tags[idx]).split('\n')
# print(idx+1, tags)
if tag is None or tag in tags:
images_list.append(path_imgs[idx])
images = visualize.read_images(images_list, folder_imgs, n_threads=n_threads, printable=printable)
return images
[docs]def load_flickr1M_dataset(tag='sky', size=10, path="data/flickr1M", n_threads=50, printable=False):
"""Returns a list of images by a given tag from Flickr1M dataset,
it will download Flickr1M from `the official website <http://press.liacs.nl/mirflickr/mirdownload.html>`_
at the first time you use it.
Parameters
------------
tag : string or None
If you want to get images with tag, use string like 'dog', 'red', see `Flickr Search <https://www.flickr.com/search/>`_.
If you want to get all images, set to ``None``.
size : int 1 to 10.
1 means 100k images ... 5 means 500k images, 10 means all 1 million images. Default is 10.
path : string
The path that the data is downloaded to, defaults is ``data/flickr25k/``.
n_threads : int, number of thread to read image.
printable : bool, print infomation when reading images, default is ``False``.
Examples
----------
- Use 200k images
>>> images = tl.files.load_flickr1M_dataset(tag='zebra', size=2)
- Use 1 Million images
>>> images = tl.files.load_flickr1M_dataset(tag='zebra')
"""
print("[Flickr1M] using {}% of images = {}".format(size*10, size*100000))
images_zip = ['images0.zip', 'images1.zip', 'images2.zip', 'images3.zip',
'images4.zip', 'images5.zip', 'images6.zip', 'images7.zip',
'images8.zip', 'images9.zip']
tag_zip = 'tags.zip'
url = 'http://press.liacs.nl/mirflickr/mirflickr1m/'
## download dataset
for image_zip in images_zip[0:size]:
image_folder = image_zip.split(".")[0]
# print(path+"/"+image_folder)
if folder_exists(path+"/"+image_folder) is False:
# print(image_zip)
print("[Flickr1M] {} is missing in {}".format(image_folder, path))
maybe_download_and_extract(image_zip, path, url, extract=True)
del_file(path+'/'+image_zip)
os.system("mv {} {}".format(path+'/images',path+'/'+image_folder))
else:
print("[Flickr1M] {} exists in {}".format(image_folder, path))
## download tag
if folder_exists(path+"/tags") is False:
print("[Flickr1M] tag files is nonexistent in {}".format(path))
maybe_download_and_extract(tag_zip, path, url, extract=True)
del_file(path+'/'+tag_zip)
else:
print("[Flickr1M] tags exists in {}".format(path))
## 1. image path list
images_list = []
images_folder_list = []
for i in range(0, size):
images_folder_list += load_folder_list(path=path+'/images%d'%i)
images_folder_list.sort(key=lambda s : int(s.split('/')[-1])) # folder/images/ddd
# print(images_folder_list)
# exit()
for folder in images_folder_list[0:size*10]:
tmp = load_file_list(path=folder, regx='\\.jpg', printable=False)
tmp.sort(key=lambda s : int(s.split('.')[-2])) # ddd.jpg
# print(tmp[0::570])
images_list.extend([folder+'/'+x for x in tmp])
# print('IM', len(images_list), images_list[0::6000])
## 2. tag path list
tag_list = []
tag_folder_list = load_folder_list(path+"/tags")
tag_folder_list.sort(key=lambda s : int(s.split('/')[-1])) # folder/images/ddd
for folder in tag_folder_list[0:size*10]:
# print(folder)
tmp = load_file_list(path=folder, regx='\\.txt', printable=False)
tmp.sort(key=lambda s : int(s.split('.')[-2])) # ddd.txt
tmp = [folder+'/'+s for s in tmp]
tag_list += tmp
# print('T', len(tag_list), tag_list[0::6000])
# exit()
## 3. select images
print("[Flickr1M] searching tag: {}".format(tag))
select_images_list = []
for idx in range(0, len(tag_list)):
tags = read_file(tag_list[idx]).split('\n')
if tag in tags:
select_images_list.append(images_list[idx])
# print(idx, tags, tag_list[idx], images_list[idx])
print("[Flickr1M] reading images with tag: {}".format(tag))
images = visualize.read_images(select_images_list, '', n_threads=n_threads, printable=printable)
return images
[docs]def load_cyclegan_dataset(filename='summer2winter_yosemite', path='data/cyclegan'):
"""Load image data from CycleGAN's database, see `this link <https://people.eecs.berkeley.edu/~taesung_park/CycleGAN/datasets/>`_.
Parameters
------------
filename : string
The dataset you want, see `this link <https://people.eecs.berkeley.edu/~taesung_park/CycleGAN/datasets/>`_.
path : string
The path that the data is downloaded to, defaults is `data/cyclegan`
Examples
---------
>>> im_train_A, im_train_B, im_test_A, im_test_B = load_cyclegan_dataset(filename='summer2winter_yosemite')
"""
url = 'https://people.eecs.berkeley.edu/~taesung_park/CycleGAN/datasets/'
if folder_exists(path+"/"+filename) is False:
print("[*] {} is nonexistent in {}".format(filename, path))
maybe_download_and_extract(filename+'.zip', path, url, extract=True)
del_file(path+'/'+filename+'.zip')
def load_image_from_folder(path):
path_imgs = load_file_list(path=path, regx='\\.jpg', printable=False)
return visualize.read_images(path_imgs, path=path, n_threads=10, printable=False)
im_train_A = load_image_from_folder(path+"/"+filename+"/trainA")
im_train_B = load_image_from_folder(path+"/"+filename+"/trainB")
im_test_A = load_image_from_folder(path+"/"+filename+"/testA")
im_test_B = load_image_from_folder(path+"/"+filename+"/testB")
def if_2d_to_3d(images): # [h, w] --> [h, w, 3]
for i in range(len(images)):
if len(images[i].shape) == 2:
images[i] = images[i][:, :, np.newaxis]
images[i] = np.tile(images[i], (1, 1, 3))
return images
im_train_A = if_2d_to_3d(im_train_A)
im_train_B = if_2d_to_3d(im_train_B)
im_test_A = if_2d_to_3d(im_test_A)
im_test_B = if_2d_to_3d(im_test_B)
return im_train_A, im_train_B, im_test_A, im_test_B
## Load and save network list npz
[docs]def save_npz(save_list=[], name='model.npz', sess=None):
"""Input parameters and the file name, save parameters into .npz file. Use tl.utils.load_npz() to restore.
Parameters
----------
save_list : a list
Parameters want to be saved.
name : a string or None
The name of the .npz file.
sess : None or Session
Examples
--------
>>> tl.files.save_npz(network.all_params, name='model_test.npz', sess=sess)
... File saved to: model_test.npz
>>> load_params = tl.files.load_npz(name='model_test.npz')
... Loading param0, (784, 800)
... Loading param1, (800,)
... Loading param2, (800, 800)
... Loading param3, (800,)
... Loading param4, (800, 10)
... Loading param5, (10,)
>>> put parameters into a TensorLayer network, please see assign_params()
Notes
-----
If you got session issues, you can change the value.eval() to value.eval(session=sess)
References
----------
- `Saving dictionary using numpy <http://stackoverflow.com/questions/22315595/saving-dictionary-of-header-information-using-numpy-savez>`_
"""
## save params into a list
save_list_var = []
if sess:
save_list_var = sess.run(save_list)
else:
try:
for k, value in enumerate(save_list):
save_list_var.append(value.eval())
except:
print(" Fail to save model, Hint: pass the session into this function, save_npz(network.all_params, name='model.npz', sess=sess)")
np.savez(name, params=save_list_var)
save_list_var = None
del save_list_var
print("[*] %s saved" % name)
## save params into a dictionary
# rename_dict = {}
# for k, value in enumerate(save_dict):
# rename_dict.update({'param'+str(k) : value.eval()})
# np.savez(name, **rename_dict)
# print('Model is saved to: %s' % name)
[docs]def load_npz(path='', name='model.npz'):
"""Load the parameters of a Model saved by tl.files.save_npz().
Parameters
----------
path : a string
Folder path to .npz file.
name : a string or None
The name of the .npz file.
Returns
--------
params : list
A list of parameters in order.
Examples
--------
- See save_npz and assign_params
References
----------
- `Saving dictionary using numpy <http://stackoverflow.com/questions/22315595/saving-dictionary-of-header-information-using-numpy-savez>`_
"""
## if save_npz save params into a dictionary
# d = np.load( path+name )
# params = []
# print('Load Model')
# for key, val in sorted( d.items() ):
# params.append(val)
# print('Loading %s, %s' % (key, str(val.shape)))
# return params
## if save_npz save params into a list
d = np.load( path+name )
# for val in sorted( d.items() ):
# params = val
# return params
return d['params']
# print(d.items()[0][1]['params'])
# exit()
# return d.items()[0][1]['params']
[docs]def assign_params(sess, params, network):
"""Assign the given parameters to the TensorLayer network.
Parameters
----------
sess : TensorFlow Session. Automatically run when sess is not None.
params : a list
A list of parameters in order.
network : a :class:`Layer` class
The network to be assigned
Returns
--------
ops : list
A list of tf ops in order that assign params. Support sess.run(ops) manually.
Examples
--------
>>> Save your network as follow:
>>> tl.files.save_npz(network.all_params, name='model_test.npz')
>>> network.print_params()
...
... Next time, load and assign your network as follow:
>>> tl.layers.initialize_global_variables(sess)
>>> load_params = tl.files.load_npz(name='model_test.npz')
>>> tl.files.assign_params(sess, load_params, network)
>>> network.print_params()
References
----------
- `Assign value to a TensorFlow variable <http://stackoverflow.com/questions/34220532/how-to-assign-value-to-a-tensorflow-variable>`_
"""
ops = []
for idx, param in enumerate(params):
ops.append(network.all_params[idx].assign(param))
if sess is not None:
sess.run(ops)
return ops
[docs]def load_and_assign_npz(sess=None, name=None, network=None):
"""Load model from npz and assign to a network.
Parameters
-------------
sess : TensorFlow Session
name : string
Model path.
network : a :class:`Layer` class
The network to be assigned
Returns
--------
Returns False if faild to model is not exist.
Examples
---------
>>> tl.files.load_and_assign_npz(sess=sess, name='net.npz', network=net)
"""
assert network is not None
assert sess is not None
if not os.path.exists(name):
print("[!] Load {} failed!".format(name))
return False
else:
params = load_npz(name=name)
assign_params(sess, params, network)
print("[*] Load {} SUCCESS!".format(name))
return network
## Load and save network dict npz
[docs]def save_npz_dict(save_list=[], name='model.npz', sess=None):
"""Input parameters and the file name, save parameters as a dictionary into .npz file.
Use ``tl.files.load_and_assign_npz_dict()`` to restore.
Parameters
----------
save_list : a list to tensor for parameters
Parameters want to be saved.
name : a string
The name of the .npz file.
sess : Session
"""
assert sess is not None
save_list_names = [tensor.name for tensor in save_list]
save_list_var = sess.run(save_list)
save_var_dict = {save_list_names[idx]: val for idx, val in enumerate(save_list_var)}
np.savez(name, **save_var_dict)
save_list_var = None
save_var_dict = None
del save_list_var
del save_var_dict
print("[*] Model saved in npz_dict %s" % name)
[docs]def load_and_assign_npz_dict(name='model.npz', sess=None):
"""Restore the parameters saved by ``tl.files.save_npz_dict()``.
Parameters
----------
name : a string
The name of the .npz file.
sess : Session
"""
assert sess is not None
if not os.path.exists(name):
print("[!] Load {} failed!".format(name))
return False
params = np.load(name)
if len(params.keys()) != len(set(params.keys())):
raise Exception("Duplication in model npz_dict %s" % name)
ops = list()
for key in params.keys():
try:
# tensor = tf.get_default_graph().get_tensor_by_name(key)
# varlist = tf.get_collection(tf.GraphKeys.TRAINABLE_VARIABLES, scope=key)
varlist = tf.get_collection(tf.GraphKeys.GLOBAL_VARIABLES, scope=key)
if len(varlist) > 1:
raise Exception("[!] Multiple candidate variables to be assigned for name %s" % key)
elif len(varlist) == 0:
raise KeyError
else:
ops.append(varlist[0].assign(params[key]))
print("[*] params restored: %s" % key)
except KeyError:
print("[!] Warning: Tensor named %s not found in network." % key)
sess.run(ops)
print("[*] Model restored from npz_dict %s" % name)
# def save_npz_dict(save_list=[], name='model.npz', sess=None):
# """Input parameters and the file name, save parameters as a dictionary into .npz file. Use tl.utils.load_npz_dict() to restore.
#
# Parameters
# ----------
# save_list : a list
# Parameters want to be saved.
# name : a string or None
# The name of the .npz file.
# sess : None or Session
#
# Notes
# -----
# This function tries to avoid a potential broadcasting error raised by numpy.
#
# """
# ## save params into a list
# save_list_var = []
# if sess:
# save_list_var = sess.run(save_list)
# else:
# try:
# for k, value in enumerate(save_list):
# save_list_var.append(value.eval())
# except:
# print(" Fail to save model, Hint: pass the session into this function, save_npz_dict(network.all_params, name='model.npz', sess=sess)")
# save_var_dict = {str(idx):val for idx, val in enumerate(save_list_var)}
# np.savez(name, **save_var_dict)
# save_list_var = None
# save_var_dict = None
# del save_list_var
# del save_var_dict
# print("[*] %s saved" % name)
#
# def load_npz_dict(path='', name='model.npz'):
# """Load the parameters of a Model saved by tl.files.save_npz_dict().
#
# Parameters
# ----------
# path : a string
# Folder path to .npz file.
# name : a string or None
# The name of the .npz file.
#
# Returns
# --------
# params : list
# A list of parameters in order.
# """
# d = np.load( path+name )
# saved_list_var = [val[1] for val in sorted(d.items(), key=lambda tup: int(tup[0]))]
# return saved_list_var
## Load and save network ckpt
[docs]def save_ckpt(sess=None, mode_name='model.ckpt', save_dir='checkpoint', var_list=[], global_step=None, printable=False):
"""Save parameters into ckpt file.
Parameters
------------
sess : Session.
mode_name : string, name of the model, default is ``model.ckpt``.
save_dir : string, path / file directory to the ckpt, default is ``checkpoint``.
var_list : list of variables, if not given, save all global variables.
global_step : int or None, step number.
printable : bool, if True, print all params info.
Examples
---------
- see ``tl.files.load_ckpt()``.
"""
assert sess is not None
ckpt_file = os.path.join(save_dir, mode_name)
if var_list == []:
var_list = tf.global_variables()
print("[*] save %s n_params: %d" % (ckpt_file, len(var_list)))
if printable:
for idx, v in enumerate(var_list):
print(" param {:3}: {:15} {}".format(idx, v.name, str(v.get_shape())))
saver = tf.train.Saver(var_list)
saver.save(sess, ckpt_file, global_step=global_step)
[docs]def load_ckpt(sess=None, mode_name='model.ckpt', save_dir='checkpoint', var_list=[], is_latest=True, printable=False):
"""Load parameters from ckpt file.
Parameters
------------
sess : Session.
mode_name : string, name of the model, default is ``model.ckpt``.
Note that if ``is_latest`` is True, this function will get the ``mode_name`` automatically.
save_dir : string, path / file directory to the ckpt, default is ``checkpoint``.
var_list : list of variables, if not given, save all global variables.
is_latest : bool, if True, load the latest ckpt, if False, load the ckpt with the name of ```mode_name``.
printable : bool, if True, print all params info.
Examples
----------
- Save all global parameters.
>>> tl.files.save_ckpt(sess=sess, mode_name='model.ckpt', save_dir='model', printable=True)
- Save specific parameters.
>>> tl.files.save_ckpt(sess=sess, mode_name='model.ckpt', var_list=net.all_params, save_dir='model', printable=True)
- Load latest ckpt.
>>> tl.files.load_ckpt(sess=sess, var_list=net.all_params, save_dir='model', printable=True)
- Load specific ckpt.
>>> tl.files.load_ckpt(sess=sess, mode_name='model.ckpt', var_list=net.all_params, save_dir='model', is_latest=False, printable=True)
"""
assert sess is not None
if is_latest:
ckpt_file = tf.train.latest_checkpoint(save_dir)
else:
ckpt_file = os.path.join(save_dir, mode_name)
if var_list == []:
var_list = tf.global_variables()
print("[*] load %s n_params: %d" % (ckpt_file, len(var_list)))
if printable:
for idx, v in enumerate(var_list):
print(" param {:3}: {:15} {}".format(idx, v.name, str(v.get_shape())))
try:
saver = tf.train.Saver(var_list)
saver.restore(sess, ckpt_file)
except Exception as e:
print(e)
print("[*] load ckpt fail ...")
## Load and save variables
[docs]def save_any_to_npy(save_dict={}, name='file.npy'):
"""Save variables to .npy file.
Examples
---------
>>> tl.files.save_any_to_npy(save_dict={'data': ['a','b']}, name='test.npy')
>>> data = tl.files.load_npy_to_any(name='test.npy')
>>> print(data)
... {'data': ['a','b']}
"""
np.save(name, save_dict)
[docs]def load_npy_to_any(path='', name='file.npy'):
"""Load .npy file.
Examples
---------
- see save_any_to_npy()
"""
file_path = os.path.join(path, name)
try:
npy = np.load(file_path).item()
except:
npy = np.load(file_path)
finally:
try:
return npy
except:
print("[!] Fail to load %s" % file_path)
exit()
## Folder functions
[docs]def file_exists(filepath):
""" Check whether a file exists by given file path. """
return os.path.isfile(filepath)
[docs]def folder_exists(folderpath):
""" Check whether a folder exists by given folder path. """
return os.path.isdir(folderpath)
[docs]def del_file(filepath):
""" Delete a file by given file path. """
os.remove(filepath)
[docs]def del_folder(folderpath):
""" Delete a folder by given folder path. """
os.rmdir(folderpath)
[docs]def read_file(filepath):
""" Read a file and return a string.
Examples
---------
>>> data = tl.files.read_file('data.txt')
"""
with open(filepath, 'r') as afile:
return afile.read()
[docs]def load_file_list(path=None, regx='\.npz', printable=True):
"""Return a file list in a folder by given a path and regular expression.
Parameters
----------
path : a string or None
A folder path.
regx : a string
The regx of file name.
printable : boolean, whether to print the files infomation.
Examples
----------
>>> file_list = tl.files.load_file_list(path=None, regx='w1pre_[0-9]+\.(npz)')
"""
if path == False:
path = os.getcwd()
file_list = os.listdir(path)
return_list = []
for idx, f in enumerate(file_list):
if re.search(regx, f):
return_list.append(f)
# return_list.sort()
if printable:
print('Match file list = %s' % return_list)
print('Number of files = %d' % len(return_list))
return return_list
[docs]def load_folder_list(path=""):
"""Return a folder list in a folder by given a folder path.
Parameters
----------
path : a string or None
A folder path.
"""
return [os.path.join(path,o) for o in os.listdir(path) if os.path.isdir(os.path.join(path,o))]
[docs]def exists_or_mkdir(path, verbose=True):
"""Check a folder by given name, if not exist, create the folder and return False,
if directory exists, return True.
Parameters
----------
path : a string
A folder path.
verbose : boolean
If True, prints results, deaults is True
Returns
--------
True if folder exist, otherwise, returns False and create the folder
Examples
--------
>>> tl.files.exists_or_mkdir("checkpoints/train")
"""
if not os.path.exists(path):
if verbose:
print("[*] creates %s ..." % path)
os.makedirs(path)
return False
else:
if verbose:
print("[!] %s exists ..." % path)
return True
[docs]def maybe_download_and_extract(filename, working_directory, url_source, extract=False, expected_bytes=None):
"""Checks if file exists in working_directory otherwise tries to dowload the file,
and optionally also tries to extract the file if format is ".zip" or ".tar"
Parameters
-----------
filename : string
The name of the (to be) dowloaded file.
working_directory : string
A folder path to search for the file in and dowload the file to
url : string
The URL to download the file from
extract : bool, defaults is False
If True, tries to uncompress the dowloaded file is ".tar.gz/.tar.bz2" or ".zip" file
expected_bytes : int/None
If set tries to verify that the downloaded file is of the specified size, otherwise raises an Exception,
defaults is None which corresponds to no check being performed
Returns
----------
filepath to dowloaded (uncompressed) file
Examples
--------
>>> down_file = tl.files.maybe_download_and_extract(filename = 'train-images-idx3-ubyte.gz',
working_directory = 'data/',
url_source = 'http://yann.lecun.com/exdb/mnist/')
>>> tl.files.maybe_download_and_extract(filename = 'ADEChallengeData2016.zip',
working_directory = 'data/',
url_source = 'http://sceneparsing.csail.mit.edu/data/',
extract=True)
"""
# We first define a download function, supporting both Python 2 and 3.
def _download(filename, working_directory, url_source):
def _dlProgress(count, blockSize, totalSize):
if(totalSize != 0):
percent = float(count * blockSize) / float(totalSize) * 100.0
sys.stdout.write("\r" "Downloading " + filename + "...%d%%" % percent)
sys.stdout.flush()
if sys.version_info[0] == 2:
from urllib import urlretrieve
else:
from urllib.request import urlretrieve
filepath = os.path.join(working_directory, filename)
urlretrieve(url_source+filename, filepath, reporthook=_dlProgress)
exists_or_mkdir(working_directory, verbose=False)
filepath = os.path.join(working_directory, filename)
if not os.path.exists(filepath):
_download(filename, working_directory, url_source)
print()
statinfo = os.stat(filepath)
print('Succesfully downloaded', filename, statinfo.st_size, 'bytes.')
if(not(expected_bytes is None) and (expected_bytes != statinfo.st_size)):
raise Exception('Failed to verify ' + filename + '. Can you get to it with a browser?')
if(extract):
if tarfile.is_tarfile(filepath):
print('Trying to extract tar file')
tarfile.open(filepath, 'r').extractall(working_directory)
print('... Success!')
elif zipfile.is_zipfile(filepath):
print('Trying to extract zip file')
with zipfile.ZipFile(filepath) as zf:
zf.extractall(working_directory)
print('... Success!')
else:
print("Unknown compression_format only .tar.gz/.tar.bz2/.tar and .zip supported")
return filepath
## Sort
[docs]def natural_keys(text):
"""Sort list of string with number in human order.
Examples
----------
>>> l = ['im1.jpg', 'im31.jpg', 'im11.jpg', 'im21.jpg', 'im03.jpg', 'im05.jpg']
>>> l.sort(key=tl.files.natural_keys)
... ['im1.jpg', 'im03.jpg', 'im05', 'im11.jpg', 'im21.jpg', 'im31.jpg']
>>> l.sort() # that is what we dont want
... ['im03.jpg', 'im05', 'im1.jpg', 'im11.jpg', 'im21.jpg', 'im31.jpg']
References
----------
alist.sort(key=natural_keys) sorts in human order
http://nedbatchelder.com/blog/200712/human_sorting.html
(See Toothy's implementation in the comments)
"""
def atoi(text):
return int(text) if text.isdigit() else text
return [ atoi(c) for c in re.split('(\d+)', text) ]
# Visualizing npz files
[docs]def npz_to_W_pdf(path=None, regx='w1pre_[0-9]+\.(npz)'):
"""Convert the first weight matrix of .npz file to .pdf by using tl.visualize.W().
Parameters
----------
path : a string or None
A folder path to npz files.
regx : a string
Regx for the file name.
Examples
--------
>>> Convert the first weight matrix of w1_pre...npz file to w1_pre...pdf.
>>> tl.files.npz_to_W_pdf(path='/Users/.../npz_file/', regx='w1pre_[0-9]+\.(npz)')
"""
file_list = load_file_list(path=path, regx=regx)
for f in file_list:
W = load_npz(path, f)[0]
print("%s --> %s" % (f, f.split('.')[0]+'.pdf'))
visualize.W(W, second=10, saveable=True, name=f.split('.')[0], fig_idx=2012)